- Published
The proteomic profile of the human myotendinous junction
Karlsen, Anders, Gonzalez-Franquesa, A., Jakobsen, J. R., Krogsgaard, Michael R., Koch, M., Kjær, Michael, Schiaffino, S., Mackey, Abigail & Deshmukh, Atul Shahaji, 2022, In: iScience. 25, 2, 19 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Targeting postsynaptic glutamate receptor scaffolding proteins PSD-95 and PICK1 for obesity treatment
Fadahunsi, N., Petersen, J. O., Metz, S., Jakobsen, A., Mathiesen, C. V., Buch-Rasmussen, A. S., Kurgan, N. K., Larsen, J. K., Andersen, R. C., Topilko, T., Svendsen, C., Apuschkin, M., Skovbjerg, G., Schmidt, J. H., Houser, G. A., Jager, S. E., Bach, A., Deshmukh, A. S., Kilpeläinen, T. O., Strømgaard, K. & 2 others, , 2024, In: Science Advances. 10, 9, 20 p., eadg2636.Research output: Contribution to journal › Journal article › Research › peer-review
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TBC1D4-S711 controls skeletal muscle insulin sensitization after exercise and contraction
Kjøbsted, Rasmus, Kristensen, Jonas Møller, Eskesen, N. O., Kido, K., Fjorder, Klara, Damgaard, D. F., Larsen, Jeppe Kjærgaard, Andersen, Nicoline Resen, Birk, Jesper Bratz, Gudiksen, Anders, Treebak, Jonas Thue, Schjerling, Peter, Pilegaard, Henriette & Wojtaszewski, Jørgen F P, 2023, In: Diabetes. 72, 7, p. 857-871 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Remission of obesity and insulin resistance is not sufficient to restore mitochondrial homeostasis in visceral adipose tissue
Gonzalez-Franquesa, A., Gama-Perez, P., Kulis, M., Szczepanowska, K., Dahdah, N., Moreno-Gomez, S., Latorre-Pellicer, A., Fernández-Ruiz, R., Aguilar-Mogas, A., Hoffman, A., Monelli, E., Samino, S., Miró-Blanch, J., Oemer, G., Duran, X., Sanchez-Rebordelo, E., Schneeberger, M., Obach, M., Montane, J., Castellano, G. & 27 others, , 2022, In: Redox Biology. 54, 18 p., 102353.Research output: Contribution to journal › Journal article › Research › peer-review
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Protocol to characterize mitochondrial supercomplexes from mouse tissues by combining BN-PAGE and MS-based proteomics
Moreno Justicia, Roger, Gonzalez-Franquesa, A., Stocks, Ben Nicholas & Deshmukh, Atul Shahaji, 2022, In: STAR Protocols. 3, 1, 21 p., 101135.Research output: Contribution to journal › Journal article › Research › peer-review
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Proteomics of Skeletal Muscle: Focus on Insulin Resistance and Exercise Biology.
Deshmukh, Atul Shahaji, 4 Feb 2016, In: Proteomes.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
ProAlanase is an Effective Alternative to Trypsin for Proteomics Applications and Disulfide Bond Mapping
Samodova, D., Hosfield, C. M., Cramer, C. N., Giuli, M. V., Cappellini, Enrico, Franciosa, Giulia, Rosenblatt, M. M., Kelstrup, C. D. & Olsen, Jesper Velgaard, 2020, In: Molecular & Cellular Proteomics. 19, 12, 19 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Plasma proteome profiling reveals metabolic and immunologic differences between Anorexia Nervosa subtypes
Samodova, D., Hoel, A., Hansen, T. H., Clausen, L., Telléus, G. K., Marti, H. P., Pedersen, Oluf Borbye, Støving, R. K. & Deshmukh, Atul Shahaji, 2024, In: Metabolism: Clinical and Experimental. 152, 11 p., 155760.Research output: Contribution to journal › Journal article › Research › peer-review
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Organ-specific metabolic pathways distinguish prediabetes, type 2 diabetes, and normal tissues
Diamanti, K., Cavalli, M., Pereira, M. J., Pan, G., Castillejo-López, C., Kumar, C., Mundt Madsen, Filip Oskar, Komorowski, J., Deshmukh, Atul Shahaji, Mann, Matthias, Korsgren, O., Eriksson, J. W. & Wadelius, C., 2022, In: Cell Reports Medicine. 3, 10, 21 p., 100763.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Multi-technique approach for qualitative and quantitative characterization of furazidin degradation kinetics under alkaline conditions
Bērziņš, Kārlis, Kons, A., Grante, I., Dzabijeva, D., Nakurte, I. & Actiņš, A., 2016, In: Journal of Pharmaceutical and Biomedical Analysis.Research output: Contribution to journal › Journal article › Research › peer-review
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Metabolic changes and propensity for inflammation, fibrosis, and cancer in livers of mice lacking lysosomal acid lipase
Bradić, I., Liesinger, L., Kuentzel, K. B., Vujić, N., Trauner, M., Birner-Gruenberger, R. & Kratky, D., 2023, In: Journal of Lipid Research. 64, 9, 12 p., 100427.Research output: Contribution to journal › Journal article › Research › peer-review
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Mass-spectrometry-based proteomics reveals mitochondrial supercomplexome plasticity
Gonzalez-Franquesa, A., Stocks, Ben Nicholas, Chubanava, Sabina, Hattel, H. B., Moreno Justicia, Roger, Peijs, Lone, Treebak, Jonas Thue, Zierath, Juleen R & Deshmukh, Atul Shahaji, 2021, In: Cell Reports. 35, 8, 20 p., 109180.Research output: Contribution to journal › Journal article › Research › peer-review
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Mass spectrometry-based proteomics approaches to interrogate skeletal muscle adaptations to exercise
Cervone, D. T., Moreno Justicia, Roger, Prats Quesada, Júlia & Deshmukh, Atul Shahaji, 2024, In: Scandinavian Journal of Medicine and Science in Sports. 34, 1, 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Integrated Liver and Plasma Proteomics in Obese Mice Reveals Complex Metabolic Regulation
Stocks, Ben Nicholas, Gonzalez-Franquesa, A., Borg, M. L., Björnholm, M., Niu, Lili, Zierath, Juleen R & Deshmukh, Atul Shahaji, 2022, In: Molecular and Cellular Proteomics. 21, 3, 19 p., 100207.Research output: Contribution to journal › Journal article › Research › peer-review
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Insulin and 5-aminoimidazole-4-carboxamide ribonucleotide (Aicar) differentially regulate the skeletal muscle cell secretome
Gonzalez-Franquesa, A., Peijs, Lone, Cervone, D. T., Koçana, C., Zierath, Juleen R & Deshmukh, Atul Shahaji, 2021, In: Proteomes. 9, 3, 16 p., 37.Research output: Contribution to journal › Journal article › Research › peer-review
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Illumination of the endogenous insulin-regulated TBC1D4 interactome in human skeletal muscle
Larsen, Jeppe Kjærgaard, Larsen, Magnus Romme, Birk, Jesper Bratz, Steenberg, D. E., Hingst, J. R., Højlund, K., Chadt, A., Al-Hasani, H., Deshmukh, Atul Shahaji, Wojtaszewski, Jørgen F P & Kjøbsted, Rasmus, 2022, In: Diabetes. 71, 5, p. 906-920Research output: Contribution to journal › Journal article › Research › peer-review
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Human thermogenic adipocyte regulation by the long noncoding RNA LINC00473
Khanh-Van Tran, Brown, E. L., DeSouza, T., Jespersen, N. Z., Nandrup-Bus, C., Yang, Q., Yang, Z., Desai, A., Min, S. Y., Rojas-Rodriguez, R., Lundh, M., Feizi, A., Willenbrock, H., Larsen, T. J., Severinsen, M. C. K., Malka, K., Mozzicato, A. M., Deshmukh, A. S., Emanuelli, B., Pedersen, B. K. & 4 others, , 2020, In: Nature Metabolism. 2, p. 397-412Research output: Contribution to journal › Journal article › Research › peer-review
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High-throughput proteomics uncovers exercise training and type 2 diabetes-induced changes in human white adipose tissue
Larsen, Jeppe Kjærgaard, Kruse, R., Sahebekhtiari, N., Moreno Justicia, Roger, Jorba, G. G., Petersen, M. H., de Almeida, M. E., Ørtenblad, N., Deshmukh, Atul Shahaji & Højlund, K., 2023, In: Science Advances. 9, 48, 16 p., eadi7548.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
High-intensity interval training remodels the proteome and acetylome of human skeletal muscle
Hostrup, Morten, Lemminger, A. K., Stocks, Ben Nicholas, Gonzalez-Franquesa, A., Larsen, Jeppe Kjærgaard, Prats Quesada, Júlia, Thomassen, Martin, Weinert, B. T., Bangsbo, Jens & Deshmukh, Atul Shahaji, 2022, In: eLife. 11, 37 p., 69802.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Harnessing the power of proteomics in precision diabetes medicine
Kurgan, Nigel Kilty, Larsen, Jeppe Kjærgaard & Deshmukh, Atul Shahaji, 2024, In: Diabetologia. 67, 5, p. 783–797Research output: Contribution to journal › Review › Research › peer-review
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GLP-1-directed NMDA receptor antagonism for obesity treatment
Petersen, J., Ludwig, M. Q., Juozaityte, V., Ranea-Robles, P., Svendsen, C., Hwang, E., Kristensen, A. W., Fadahunsi, N., Lund, J., Breum, A. W., Mathiesen, C. V., Sachs, L., Moreno-Justicia, R., Rohlfs, R., Ford, J. C., Douros, J. D., Finan, B., Portillo, B., Grose, K., Petersen, J. E. & 13 others, , 2024, In: Nature. 629, 8014, p. 1133–1141Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Exercise-induced increase in muscle insulin sensitivity in men is amplified when assessed using a meal test
Voldstedlund, Christian T, Sjøberg, K. A., Schlabs, Farina Leonie, Sigvardsen, Casper Møller, Andersen, Nicoline Resen, Holst, Jens Juul, Hartmann, Bolette, Wojtaszewski, Jørgen F P, Kiens, Bente, McConell, G. K. & Richter, Erik A., 2024, In: Diabetologia. 67, p. 1386–1398Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Exercise-induced crosstalk between immune cells and adipocytes in humans: Role of oncostatin-M
Dollet, L., Lundell, L. S., Chibalin, A. V., Pendergrast, L. A., Pillon, N. J., Lansbury, Elizabeth Laura, Elmastas, M., Frendo-Cumbo, S., Jalkanen, J., de Castro Barbosa, T., Cervone, D. T., Caidahl, K., Dmytriyeva, O., Deshmukh, Atul Shahaji, Barrès, Romain, Rydén, M., Wallberg-Henriksson, H., Zierath, Juleen R & Krook, A., 2024, In: Cell Reports Medicine. 5, 1, 20 p., 101348.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Exercise timing influences multi-tissue metabolome and skeletal muscle proteome profiles in type 2 diabetic patients - A randomized crossover trial
Savikj, M., Stocks, Ben Nicholas, Sato, S., Caidahl, K., Krook, A., Deshmukh, Atul Shahaji, Zierath, Juleen R & Wallberg-Henriksson, H., 2022, In: Metabolism. 135, 14 p., 155268.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Discovery of thymosin β4 as a human exerkine and growth factor
Gonzalez-Franquesa, A., Stocks, Ben Nicholas, Borg, M. L., Kuefner, M., Kellezi, Emilie Dalbram, Nielsen, Thomas Svava, Agrawal, A., Pankratova, Stanislava, Chibalin, A. V., Karlsson, H. K. R., Gheibi, S., Björnholm, M., Jørgensen, Niklas Rye, Clemmensen, Christoffer, Treebak, Jonas Thue, Hostrup, Morten, Krook, A., Zierath, Juleen R & Deshmukh, Atul Shahaji, 2021, In: American Journal of Physiology: Cell Physiology. 321, 5, p. C770-C778 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Deep muscle-proteomic analysis of freeze-dried human muscle biopsies reveals fiber type-specific adaptations to exercise training
Deshmukh, Atul Shahaji, Steenberg, D. E., Hostrup, Morten, Birk, Jesper Bratz, Larsen, Jeppe Kjærgaard, Santos, A., Kjøbsted, Rasmus, Hingst, J. R., Schéele, Camilla Charlotte Nielsen, Murgia, M., Kiens, Bente, Richter, Erik A., Mann, Matthias & Wojtaszewski, Jørgen F P, 2021, In: Nature Communications. 12, 15 p., 304.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
CaMKK2 is not involved in contraction-stimulated AMPK activation and glucose uptake in skeletal muscle
Negoita, F., Addinsall, A. B., Hellberg, K., Bringas, C. F., Hafen, P. S., Sermersheim, T. J., Agerholm, M., Lewis, C. T. A., Ahwazi, D., Ling, N. X. Y., Larsen, J. K., Deshmukh, A. S., Hossain, M. A., Oakhill, J. S., Ochala, J., Brault, J. J., Sankar, U., Drewry, D. H., Scott, J. W., Witczak, C. A. & 1 others, , 2023, In: Molecular Metabolism. 75, 14 p., 101761.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Atorvastatin for prevention of disease progression and hospitalisation in liver cirrhosis: protocol for a randomised, double-blind, placebo-controlled trial
Kimer, N., Grønbæk, H., Fred, Rikard Göran, Hansen, Torben, Deshmukh, Atul Shahaji, Mann, Matthias & Bendtsen, Flemming, 2020, In: BMJ Open. 10, 1, 7 p., e035284.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Adipogenic and SWAT cells separate from a common progenitor in human brown and white adipose depots
Palani, Nagendra Prasad, Horvath, C., Timshel, P. N., Folkertsma, P., Grønning, Alexander GB, Henriksen, T. I., Peijs, Lone, Jensen, V. H., Sun, W., Jespersen, N. Z., Wolfrum, C., Pers, Tune H, Nielsen, S. & Schéele, Camilla Charlotte Nielsen, 2023, In: Nature Metabolism. 5, 6, p. 996-1013 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A Multi-Omics Approach to Liver Diseases: Integration of Single Nuclei Transcriptomics with Proteomics and HiCap Bulk Data in Human Liver
Cavalli, M., Diamanti, K., Pan, G., Spalinskas, R., Kumar, C., Deshmukh, Atul Shahaji, Mann, Matthias, Sahlén, P., Komorowski, J. & Wadelius, C., 2020, In: O M I C S: A Journal of Integrative Biology. 24, 4, 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
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A Multi-Omics Approach to Liver Diseases: Integration of Single Nuclei Transcriptomics with Proteomics and HiCap Bulk Data in Human Liver
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Deep muscle-proteomic analysis of freeze-dried human muscle biopsies reveals fiber type-specific adaptations to exercise training
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Atorvastatin for prevention of disease progression and hospitalisation in liver cirrhosis: protocol for a randomised, double-blind, placebo-controlled trial
Research output: Contribution to journal › Journal article › Research › peer-review
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Latest publications
Targeting postsynaptic glutamate receptor scaffolding proteins PSD-95 and PICK1 for obesity treatment
Research output: Contribution to journal › Journal article › Research › peer-review
Plasma proteome profiling reveals metabolic and immunologic differences between Anorexia Nervosa subtypes
Research output: Contribution to journal › Journal article › Research › peer-review
Exercise-induced increase in muscle insulin sensitivity in men is amplified when assessed using a meal test
Research output: Contribution to journal › Journal article › Research › peer-review