Genome-wide association studies in the Japanese population identify seven novel loci for type 2 diabetes

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  • Minako Imamura
  • Atsushi Takahashi
  • Toshimasa Yamauchi
  • Kazuo Hara
  • Kazuki Yasuda
  • Wei Zhao
  • Xu Wang
  • Alicia Huerta-Chagoya
  • Cheng Hu
  • Sanghoon Moon
  • Jirong Long
  • Soo Heon Kwak
  • Asif Rasheed
  • Richa Saxena
  • Ronald C W Ma
  • Yukinori Okada
  • Minoru Iwata
  • Jun Hosoe
  • Nobuhiro Shojima
  • Minaka Iwasaki
  • Hayato Fujita
  • Ken Suzuki
  • John Danesh
  • Torben Jørgensen
  • Marit E Jørgensen
  • Daniel R Witte
  • Ivan Brandslund
  • Cramer Christensen
  • Josep M Mercader
  • Jason Flannick
  • Hortensia Moreno-Macías
  • Noël P Burtt
  • Rong Zhang
  • Young Jin Kim
  • Wei Zheng
  • Jai Rup Singh
  • Claudia H T Tam
  • Hiroshi Hirose
  • Hiroshi Maegawa
  • Chikako Ito
  • Kohei Kaku
  • Hirotaka Watada
  • Yasushi Tanaka
  • Kazuyuki Tobe
  • Ryuzo Kawamori
  • Michiaki Kubo
  • Yoon Shin Cho
  • Juliana C N Chan
  • Dharambir Sanghera
  • Philippe Frossard
  • Kyong Soo Park
  • Xiao-Ou Shu
  • Bong-Jo Kim
  • Jose C Florez
  • Teresa Tusié-Luna
  • Weiping Jia
  • E Shyong Tai
  • Danish Saleheen
  • Shiro Maeda
  • Takashi Kadowaki

Genome-wide association studies (GWAS) have identified more than 80 susceptibility loci for type 2 diabetes (T2D), but most of its heritability still remains to be elucidated. In this study, we conducted a meta-analysis of GWAS for T2D in the Japanese population. Combined data from discovery and subsequent validation analyses (23,399 T2D cases and 31,722 controls) identify 7 new loci with genome-wide significance (P<5 × 10(-8)), rs1116357 near CCDC85A, rs147538848 in FAM60A, rs1575972 near DMRTA1, rs9309245 near ASB3, rs67156297 near ATP8B2, rs7107784 near MIR4686 and rs67839313 near INAFM2. Of these, the association of 4 loci with T2D is replicated in multi-ethnic populations other than Japanese (up to 65,936 T2Ds and 158,030 controls, P<0.007). These results indicate that expansion of single ethnic GWAS is still useful to identify novel susceptibility loci to complex traits not only for ethnicity-specific loci but also for common loci across different ethnicities.

Original languageEnglish
Article number10531
JournalNature Communications
Volume7
Number of pages12
ISSN2041-1723
DOIs
Publication statusPublished - 2016

ID: 156084624