A meta-analysis of 120 246 individuals identifies 18 new loci for fibrinogen concentration

Research output: Contribution to journalJournal articleResearchpeer-review

  • Paul S de Vries
  • Daniel I Chasman
  • Maria Sabater-Lleal
  • Ming-Huei Chen
  • Jennifer E Huffman
  • Maristella Steri
  • Weihong Tang
  • Alexander Teumer
  • Riccardo E Marioni
  • Vera Grossmann
  • Jouke J Hottenga
  • Stella Trompet
  • Martina Müller-Nurasyid
  • Jing Hua Zhao
  • Jennifer A Brody
  • Marcus E Kleber
  • Xiuqing Guo
  • Jie Jin Wang
  • Paul L Auer
  • John R Attia
  • Lisa R Yanek
  • Jari Lahti
  • Cristina Venturini
  • Toshiko Tanaka
  • Lawrence F Bielak
  • Peter K Joshi
  • Ares Rocanin-Arjo
  • Ivana Kolcic
  • Pau Navarro
  • Lynda M Rose
  • Christopher Oldmeadow
  • Helene Riess
  • Johanna Mazur
  • Saonli Basu
  • Anuj Goel
  • Qiong Yang
  • Mohsen Ghanbari
  • Gonneke Willemsen
  • Ann Rumley
  • Edoardo Fiorillo
  • Anton J M de Craen
  • Anne Grotevendt
  • Robert Scott
  • Kent D Taylor
  • Graciela E Delgado
  • Jie Yao
  • Annette Kifley
  • Charles Kooperberg
  • Rehan Qayyum
  • Lorna M Lopez
  • Tina L Berentzen
  • Katri Räikkönen
  • Massimo Mangino
  • Stefania Bandinelli
  • Patricia A Peyser
  • Sarah Wild
  • David-Alexandre Trégouët
  • Alan F Wright
  • Jonathan Marten
  • Tatijana Zemunik
  • Alanna C Morrison
  • Bengt Sennblad
  • Geoffrey Tofler
  • Moniek P M de Maat
  • Eco J C de Geus
  • Gordon D Lowe
  • Magdalena Zoledziewska
  • Naveed Sattar
  • Harald Binder
  • Uwe Völker
  • Melanie Waldenberger
  • Kay-Tee Khaw
  • Barbara McKnight
  • Jie Huang
  • Nancy S Jenny
  • Elizabeth G Holliday
  • Lihong Qi
  • Mark G McEvoy
  • Diane M Becker
  • John M Starr
  • Antti-Pekka Sarin
  • Pirro G Hysi
  • Dena G Hernandez
  • Min A Jhun
  • Harry Campbell
  • Anders Hamsten
  • Fernando Rivadeneira
  • Wendy L McArdle
  • P Eline Slagboom
  • Tanja Zeller
  • Wolfgang Koenig
  • Bruce M Psaty
  • Talin Haritunians
  • Jingmin Liu
  • Aarno Palotie
  • André G Uitterlinden
  • David J Stott
  • Albert Hofman
  • Oscar H Franco
  • Ozren Polasek
  • Igor Rudan
  • Pierre-Emmanuel Morange
  • James F Wilson
  • Sharon L R Kardia
  • Luigi Ferrucci
  • Tim D Spector
  • Johan G Eriksson
  • Ian J Deary
  • Lewis C Becker
  • Rodney J Scott
  • Paul Mitchell
  • Winfried März
  • Nick J Wareham
  • Annette Peters
  • Andreas Greinacher
  • Philipp S Wild
  • Jan W Jukema
  • Dorret I Boomsma
  • Caroline Hayward
  • Francesco Cucca
  • Russell Tracy
  • Hugh Watkins
  • Alex P Reiner
  • Aaron R Folsom
  • Paul M Ridker
  • Christopher J O'Donnell
  • Nicholas L Smith
  • David P Strachan
  • Abbas Dehghan

Genome-wide association studies have previously identified 23 genetic loci associated with circulating fibrinogen concentration. These studies used HapMap imputation and did not examine the X chromosome. 1000 Genomes imputation provides better coverage of uncommon variants, and includes indels. We conducted a genome-wide association analysis of 34 studies imputed to the 1000 Genomes Project reference panel and including ∼120,000 participants of European ancestry (95,806 participants with data on the X chromosome). Approximately 10.7 million SNPs and 1.2 million indels were examined. We identified 41 genome-wide significant fibrinogen loci of which 18 were newly identified. There were no genome-wide significant signals on the X chromosome. The lead variants of 5 significant loci were indels. We further identified 6 additional independent signals, including 3 rare variants, at two previously characterized loci: FGB and IRF1. Together the 41 loci explain 3% of the variance in plasma fibrinogen concentration.

Original languageEnglish
JournalHuman Molecular Genetics
Volume25
Issue number2
Pages (from-to)358-370
Number of pages13
ISSN0964-6906
DOIs
Publication statusPublished - 2016

ID: 150705097