Mikkel Schubert

Mikkel Schubert

head of section, secretary

ORCID: 0000-0003-2401-9921

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  1. Published

    A genomewide catalogue of single nucleotide polymorphisms in white-beaked and Atlantic white-sided dolphins

    Fernandez Garcia, R., Schubert, Mikkel, Vargas-Velazquez, A. M., Brownlow, A., Vikingsson, G. A., Siebert, U., Jensen, L. F., Øien, N., Wall, D., Rogan, E., Mikkelsen, B., Dabin, W., Alfarhan, A. H., Alquraishi, S. A., Al-Rasheid, K. A. S., Guillot, G. & Orlando, L. A. A., 2016, In: Molecular Ecology Resources. 16, 1, p. 266-276 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    AdapterRemoval v2: rapid adapter trimming, identification, and read merging

    Schubert, Mikkel, Lindgreen, S. & Orlando, L. A. A., 2016, In: BMC Research Notes. 9, 7 p., 88.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    African bushpigs exhibit porous species boundaries and appeared in Madagascar concurrently with human arrival

    Balboa, R. F., Bertola, L. D., Brüniche-Olsen, A., Rasmussen, M. S., Liu, X., Besnard, G., Salmona, J., Santander, C. G., He, S., Zinner, D., Pedrono, M., Muwanika, V., Masembe, C., Schubert, M., Kuja, J., Quinn, L., Garcia-Erill, G., Stæger, F. F., Rakotoarivony, R., Henrique, M. & 14 others, Lin, Long, Wang, X., Heaton, M. P., Smith, T. P. L., Hanghøj, Kristian Ebbesen, Sinding, Mikkel Holger Strander, Atickem, A., Chikhi, L., Roos, C., Gaubert, P., Siegismund, Hans Redlef, Moltke, Ida, Albrechtsen, Anders & Heller, Rasmus, 2024, In: Nature Communications. 15, 1, 15 p., 172.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Ancient genomes revisit the ancestry of domestic and Przewalski's horses

    Gaunitz, C., Fages, A. A., Hanghøj, K. E., Albrechtsen, A., Khan, N., Schubert, M., Seguin-Orlando, A., Owens, I. J., Felkel, S., Bignon-Lau, O., Damgaard, P. D. B., Mittnik, A., Mohaseb, A. F., Davoudi, H., Alquraishi, S., Alfarhan, A. H., Al-Rasheid, K. A. S., Crubézy, E., Benecke, N., Olsen, S. & 27 others, Brown, D., Anthony, D., Massy, K., Pitulko, V., Kasparov, A., Brem, G., Hofreiter, M., Mukhtarova, G., Baimukhanov, N., Lõugas, L., Onar, V., Stockhammer, P. W., Krause, J., Boldgiv, B., Undrakhbold, S., Erdenebaatar, D., Lepetz, S., Mashkour, M., Ludwig, A., Wallner, B., Merz, V., Merz, I., Zaibert, V., Willerslev, Eske, Sanz, P. L., Outram, A. K. & Orlando, L. A. A., 2018, In: Science. 360, 6384, p. 111-114 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Ancient genomic changes associated with domestication of the horse

    Sanz, P. L., Gamba, C., Gaunitz, C., Der Sarkissian, C., Pruvost, M., Albrechtsen, A., Fages, A. A., Khan, N., Schubert, M., Jagannathan, V., Serres-Armero, A., Kuderna, L. F. K., Povolotskaya, I. S., Seguin-Orlando, A., Lepetz, S., Neuditschko, M., Thèves, C., Alquraishi, S., Alfarhan, A. H., AL-Rasheid, K. & 13 others, Rieder, S., Samashev, Z., Francfort, H., Benecke, N., Hofreiter, M., Ludwig, A., Keyser, C., Marques-Bonet, T., Ludes, B., Crubézy, E., Leeb, T., Willerslev, Eske & Orlando, L. A. A., 28 Apr 2017, In: Science. 356, 6336, p. 442-445 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Ancient genomics

    Der Sarkissian, C., Allentoft, M. E., Avila Arcos, M. D. C., Barnett, R., Campos, P. F., Cappellini, E., Ermini, L., Fernandez Garcia, R., Rodrigues da Fonseca, R. A., Ginolhac, A., Hansen, A. J., Jónsson, H., Korneliussen, T. S., Margaryan, A., Martin, M. D., Moreno Mayar, J. V., Raghavan, M., Rasmussen, M., Sandoval Velasco, M., Schroeder, H. & 6 others, Schubert, Mikkel, Seguin-Orlando, A., Wales, N., Gilbert, M Thomas P, Willerslev, Eske & Orlando, L. A. A., 2015, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 370, 1660, 12 p., 20130387.

    Research output: Contribution to journal › Review › Research › peer-review

  7. Published

    Authentication and assessment of contamination in ancient DNA

    Renaud, Gabriel, Schubert, Mikkel, Sawyer, S. & Orlando, L., 2019, Ancient DNA: Methods and Protocols. Shapiro, B., Barlow, A., Heintzman, P. D., Hofreiter, M., Paijmans, J. L. A. & Soares, A. E. R. (eds.). 2. ed. ed. Humana Press, p. 163-194 32 p. (Methods in Molecular Biology, Vol. 1963).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  8. Published

    Characterization of ancient and modern genomes by SNP detection and phylogenomic and metagenomic analysis using PALEOMIX

    Schubert, Mikkel, Ermini, L., Der Sarkissian, C., Jónsson, H., Ginolhac, A., Schaefer, R., Martin, M. D., Fernandez Garcia, R., Kircher, M., McCue, M., Willerslev, Eske & Orlando, L. A. A., 2014, In: Nature Protocols. 9, 5, p. 1056-82 27 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Comparative genomics reveals insights into avian genome evolution and adaptation

    Zhang, G., Li, C., Li, Q., Li, B., Larkin, D. M., Lee, C., Storz, J. F., Antunes, A., Greenwold, M. J., Meredith, R. W., Ödeen, A., Cui, J., Zhou, Q., Xu, L., Pan, H., Wang, Z., Jin, L., Zhang, P., Hu, H., Yang, W. & 85 others, Hu, J., Xiao, J., Yang, Z., Liu, Y., Xie, Q., Yu, H., Lian, J., Wen, P., Zhang, F., Li, H., Zeng, Y., Xiong, Z., Liu, S., Zhou, L., Huang, Z., An, N., Wang, J., Zheng, Q., Xiong, Y., Wang, G., Wang, B., Wang, J., Fan, Y., Rodrigues da Fonseca, Rute Andreia, Alfaro Nuñez, L. A., Schubert, Mikkel, Orlando, L. A. A., Mourier, T., Howard, J. T., Ganapathy, G., Pfenning, A., Whitney, O., Rivas, M. V., Hara, E., Smith, J., Farré, M., Narayan, J., Slavov, G., Romanov, M. N., Borges, R., MacHado, J. P., Khan, I., Springer, M. S., Gatesy, J., Hoffmann, F. G., Opazo, J. C., Håstad, O., Sawyer, R. H., Kim, H., Kim, K. W., Kim, H. J., Cho, S., Li, N., Huang, Y., Bruford, M. W., Zhan, X., Dixon, A., Bertelsen, Mads Frost, Derryberry, E., Warren, W., Wilson, R. K., Li, S., Ray, D. A., Green, R. E., O'Brien, S. J., Griffin, D., Johnson, W. E., Haussler, D., Ryder, O. A., Willerslev, Eske, Graves, G. R., Alström, P., Fjeldså, Jon, Mindell, D. P., Edwards, S. V., Braun, E. L., Rahbek, Carsten, Burt, D. W., Houde, P., Zhang, Y., Yang, H., Wang, J., Jarvis, E. D., Gilbert, M Thomas P & Wang, J., 2014, In: Science. 346, 6215, p. 1311-1320 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Developing a 670k genotyping array to tag ~2M SNPs across 24 horse breeds

    Schaefer, R. J., Schubert, M., Bailey, E., Bannasch, D. L., Barrey, E., Bar-Gal, G. K., Brem, G., Brooks, S. A., Distl, O., Fries, R., Finno, C. J., Gerber, V., Haase, B., Jagannathan, V., Kalbfleisch, T., Leeb, T., Lindgren, G., Lopes, M. S., Mach, N., Machado, A. D. C. & 15 others, MacLeod, J. N., McCoy, A., Metzger, J., Penedo, C., Polani, S., Rieder, S., Tammen, I., Tetens, J., Thaller, G., Verini-Supplizi, A., Wade, C., Wallner, B., Orlando, L. A. A., Mickelson, J. R. & McCue, M. E., 27 Jul 2017, In: BMC Genomics. 18, 18 p., 565.

    Research output: Contribution to journal › Journal article › Research › peer-review

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ID: 336978246