Enterotypes in the landscape of gut microbial community composition

Research output: Contribution to journal › Journal article › Research › peer-review

Standard

Enterotypes in the landscape of gut microbial community composition. / Costea, Paul I.; Hildebrand, Falk; Manimozhiyan, Arumugam; Bäckhed, Fredrik; Blaser, Martin J.; Bushman, Frederic D.; De Vos, Willem M.; Ehrlich, S. Dusko; Fraser, Claire M.; Hattori, Masahira; Huttenhower, Curtis; Jeffery, Ian B.; Knights, Dan; Lewis, James D.; Ley, Ruth E.; Ochman, Howard; O'Toole, Paul W.; Quince, Christopher; Relman, David A.; Shanahan, Fergus; Sunagawa, Shinichi; Wang, Jun; Weinstock, George M.; Wu, Gary D.; Zeller, Georg; Zhao, Liping; Raes, Jeroen; Knight, Rob; Bork, Peer.

In: Nature Microbiology, Vol. 3, No. 1, 2018, p. 8-16.

Research output: Contribution to journal › Journal article › Research › peer-review

Harvard

Costea, PI, Hildebrand, F, Manimozhiyan, A, Bäckhed, F, Blaser, MJ, Bushman, FD, De Vos, WM, Ehrlich, SD, Fraser, CM, Hattori, M, Huttenhower, C, Jeffery, IB, Knights, D, Lewis, JD, Ley, RE, Ochman, H, O'Toole, PW, Quince, C, Relman, DA, Shanahan, F, Sunagawa, S, Wang, J, Weinstock, GM, Wu, GD, Zeller, G, Zhao, L, Raes, J, Knight, R & Bork, P 2018, 'Enterotypes in the landscape of gut microbial community composition', Nature Microbiology, vol. 3, no. 1, pp. 8-16. https://doi.org/10.1038/s41564-017-0072-8

APA

Costea, P. I., Hildebrand, F., Manimozhiyan, A., Bäckhed, F., Blaser, M. J., Bushman, F. D., De Vos, W. M., Ehrlich, S. D., Fraser, C. M., Hattori, M., Huttenhower, C., Jeffery, I. B., Knights, D., Lewis, J. D., Ley, R. E., Ochman, H., O'Toole, P. W., Quince, C., Relman, D. A., ... Bork, P. (2018). Enterotypes in the landscape of gut microbial community composition. Nature Microbiology, 3(1), 8-16. https://doi.org/10.1038/s41564-017-0072-8

Vancouver

Costea PI, Hildebrand F, Manimozhiyan A, Bäckhed F, Blaser MJ, Bushman FD et al. Enterotypes in the landscape of gut microbial community composition. Nature Microbiology. 2018;3(1):8-16. https://doi.org/10.1038/s41564-017-0072-8

Author

Costea, Paul I. ; Hildebrand, Falk ; Manimozhiyan, Arumugam ; Bäckhed, Fredrik ; Blaser, Martin J. ; Bushman, Frederic D. ; De Vos, Willem M. ; Ehrlich, S. Dusko ; Fraser, Claire M. ; Hattori, Masahira ; Huttenhower, Curtis ; Jeffery, Ian B. ; Knights, Dan ; Lewis, James D. ; Ley, Ruth E. ; Ochman, Howard ; O'Toole, Paul W. ; Quince, Christopher ; Relman, David A. ; Shanahan, Fergus ; Sunagawa, Shinichi ; Wang, Jun ; Weinstock, George M. ; Wu, Gary D. ; Zeller, Georg ; Zhao, Liping ; Raes, Jeroen ; Knight, Rob ; Bork, Peer. / Enterotypes in the landscape of gut microbial community composition. In: Nature Microbiology. 2018 ; Vol. 3, No. 1. pp. 8-16.

Bibtex

@article{3e19bdcd30504bc2bd568beabb7c8a25,
title = "Enterotypes in the landscape of gut microbial community composition",
abstract = "Population stratification is a useful approach for a better understanding of complex biological problems in human health and wellbeing. The proposal that such stratification applies to the human gut microbiome, in the form of distinct community composition types termed enterotypes, has been met with both excitement and controversy. In view of accumulated data and re-analyses since the original work, we revisit the concept of enterotypes, discuss different methods of dividing up the landscape of possible microbiome configurations, and put these concepts into functional, ecological and medical contexts. As enterotypes are of use in describing the gut microbial community landscape and may become relevant in clinical practice, we aim to reconcile differing views and encourage a balanced application of the concept.",
author = "Costea, {Paul I.} and Falk Hildebrand and Arumugam Manimozhiyan and Fredrik B{\"a}ckhed and Blaser, {Martin J.} and Bushman, {Frederic D.} and {De Vos}, {Willem M.} and Ehrlich, {S. Dusko} and Fraser, {Claire M.} and Masahira Hattori and Curtis Huttenhower and Jeffery, {Ian B.} and Dan Knights and Lewis, {James D.} and Ley, {Ruth E.} and Howard Ochman and O'Toole, {Paul W.} and Christopher Quince and Relman, {David A.} and Fergus Shanahan and Shinichi Sunagawa and Jun Wang and Weinstock, {George M.} and Wu, {Gary D.} and Georg Zeller and Liping Zhao and Jeroen Raes and Rob Knight and Peer Bork",
note = "Publisher Correction: Enterotypes in the landscape of gut microbial community composition DOI:10.1038/s41564-018-0114-x",
year = "2018",
doi = "10.1038/s41564-017-0072-8",
language = "English",
volume = "3",
pages = "8--16",
journal = "Nature Microbiology",
issn = "2058-5276",
publisher = "nature publishing group",
number = "1",

}

RIS

TY - JOUR

T1 - Enterotypes in the landscape of gut microbial community composition

AU - Costea, Paul I.

AU - Hildebrand, Falk

AU - Manimozhiyan, Arumugam

AU - Bäckhed, Fredrik

AU - Blaser, Martin J.

AU - Bushman, Frederic D.

AU - De Vos, Willem M.

AU - Ehrlich, S. Dusko

AU - Fraser, Claire M.

AU - Hattori, Masahira

AU - Huttenhower, Curtis

AU - Jeffery, Ian B.

AU - Knights, Dan

AU - Lewis, James D.

AU - Ley, Ruth E.

AU - Ochman, Howard

AU - O'Toole, Paul W.

AU - Quince, Christopher

AU - Relman, David A.

AU - Shanahan, Fergus

AU - Sunagawa, Shinichi

AU - Wang, Jun

AU - Weinstock, George M.

AU - Wu, Gary D.

AU - Zeller, Georg

AU - Zhao, Liping

AU - Raes, Jeroen

AU - Knight, Rob

AU - Bork, Peer

N1 - Publisher Correction: Enterotypes in the landscape of gut microbial community composition DOI:10.1038/s41564-018-0114-x

PY - 2018

Y1 - 2018

N2 - Population stratification is a useful approach for a better understanding of complex biological problems in human health and wellbeing. The proposal that such stratification applies to the human gut microbiome, in the form of distinct community composition types termed enterotypes, has been met with both excitement and controversy. In view of accumulated data and re-analyses since the original work, we revisit the concept of enterotypes, discuss different methods of dividing up the landscape of possible microbiome configurations, and put these concepts into functional, ecological and medical contexts. As enterotypes are of use in describing the gut microbial community landscape and may become relevant in clinical practice, we aim to reconcile differing views and encourage a balanced application of the concept.

AB - Population stratification is a useful approach for a better understanding of complex biological problems in human health and wellbeing. The proposal that such stratification applies to the human gut microbiome, in the form of distinct community composition types termed enterotypes, has been met with both excitement and controversy. In view of accumulated data and re-analyses since the original work, we revisit the concept of enterotypes, discuss different methods of dividing up the landscape of possible microbiome configurations, and put these concepts into functional, ecological and medical contexts. As enterotypes are of use in describing the gut microbial community landscape and may become relevant in clinical practice, we aim to reconcile differing views and encourage a balanced application of the concept.

U2 - 10.1038/s41564-017-0072-8

DO - 10.1038/s41564-017-0072-8

M3 - Journal article

C2 - 29255284

VL - 3

SP - 8

EP - 16

JO - Nature Microbiology

JF - Nature Microbiology

SN - 2058-5276

IS - 1

ER -

ID: 217338261